Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_27874485_27882157_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27874485 - 27882157

Intron Length:

7673

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTGAG

5'SS Class:

strong_major

3'SS Sequence:

CTTCCCCTTGGAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTTTCTTTTATC

Flanking Amino Acid:

SHSPQHYSRPGSESGRSTPS

Intron Amino Acid Position:

490

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

74.2

36.3

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

0.25

1.7

69.2

31.3

Minor 5ss

32.1

-2

3.1

40.2

45.9

Minor BPS

72.5

0.69

1.5

82.19

31.8

Associated Gene:

Gene:

ABLIM2

Ensembl Gene ID:

ENSAPLG00000012162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012686

27774004 - 27910844

136841