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Intron Name: Anas_platyrhynchos_platyrhynchos_4_2796502_2797028_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
5UTR

Intron Coordinates:
2796502 - 2797028

Intron Length:
527

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAAAATG

5'SS Class:
strong_major

3'SS Sequence:
TCTCAGCTTCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTCTCAG

U12 Branch Point Sequence:
CTCGCCCTGACT

Flanking Amino Acid:
5UTR

Intron Amino Acid Position:
5UTR

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.1
0.78
0.9
77.9
36.7

Major BPS
58.6
0.22
1.5
69
38.9

Major PPT
75.6
0.58
0.9
65.4
40.8

Minor 5ss
36.4
-1.5
3.1
48.5
47.2

Minor BPS
54
0.2
1.9
71.64
45.5

Associated Gene:

Gene:
METTL14

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2796358 - 2821128
24771

2786327 - 2821652
35326