About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_2797525_2798854_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
2797525 - 2798854

Intron Length:
1330

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCG|GTCAGTACG

5'SS Class:
major

3'SS Sequence:
TGCATGCTTTTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
GCTATTTTATAT

Flanking Amino Acid:
REIAETRETCRASYDTSAPN

Intron Amino Acid Position:
52

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.4
0.51
1.3
66.6
44.7

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
69.7
0.44
0.9
65.9
40.8

Minor 5ss
31.9
-2.1
2.5
36.7
39.7

Minor BPS
47.6
-0.1
1.7
61.91
42.2

Associated Gene:

Gene:
METTL14

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2786327 - 2821652
35326

2796358 - 2821128
24771

2796358 - 2821128
24771