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Intron Name: Anas_platyrhynchos_platyrhynchos_4_28010991_28014863_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28010991 - 28014863

Intron Length:

3873

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

GCTTTCTTCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

GCTTTCTTCACA

Flanking Amino Acid:

IATVCNGKEQVKRKKSSKSE

Intron Amino Acid Position:

302

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.8

1.08

0.7

85.3

32.2

Major BPS

81.6

0.78

0.8

24.9

Major PPT

81.3

0.7

0.8

75.6

32.9

Minor 5ss

38.8

-1.3

52.9

44.3

Minor BPS

63.4

0.41

1.8

71.26

41.2

Associated Gene:

Gene:

AFAP1

Ensembl Gene ID:

ENSAPLG00000012327

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042735

27974536 - 28033041

58506

ENSAPLT00000028518

27974536 - 28035827

61292

ENSAPLT00000020888

27974536 - 28033131

58596

ENSAPLT00000012905

27974536 - 28035719

61184

ENSAPLT00000045571

27974536 - 28036137

61602