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Intron Name: Anas_platyrhynchos_platyrhynchos_4_28020412_28024036_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28020412 - 28024036

Intron Length:

3625

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGAGGC

5'SS Class:

major

3'SS Sequence:

TTGCCTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATTATTT

Flanking Amino Acid:

SVIQAAKQTFCFMNRRVIST

Intron Amino Acid Position:

471

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

0.9

62.1

36.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

86.2

0.81

0.8

84.4

30.5

Minor 5ss

25.5

-2.8

3.2

29.5

37.3

Minor BPS

62.5

0.47

1.8

84.55

36.3

Associated Gene:

Gene:

AFAP1

Ensembl Gene ID:

ENSAPLG00000012327

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020888

27974536 - 28033131

58596

ENSAPLT00000012905

27974536 - 28035719

61184

ENSAPLT00000045571

27974536 - 28036137

61602

ENSAPLT00000042735

27974536 - 28033041

58506

ENSAPLT00000028518

27974536 - 28035827

61292