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Intron Name: Anas_platyrhynchos_platyrhynchos_4_28024155_28025697_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28024155 - 28025697

Intron Length:

1543

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

GTGTGTGTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAC

U12 Branch Point Sequence:

TGTTTACTAACT

Flanking Amino Acid:

YDDVPCINGSWEPEDGFPSS

Intron Amino Acid Position:

511

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

84.9

32.3

Major BPS

76.8

0.67

0.9

75.9

Major PPT

72.3

0.5

1.1

65.2

45.5

Minor 5ss

39.9

-1.1

3.2

59.5

44.6

Minor BPS

59.4

0.37

1.9

82.74

37.8

Associated Gene:

Gene:

AFAP1

Ensembl Gene ID:

ENSAPLG00000012327

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042735

27974536 - 28033041

58506

ENSAPLT00000012905

27974536 - 28035719

61184