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Intron Name: Anas_platyrhynchos_platyrhynchos_4_28025956_28027461_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28025956 - 28027461

Intron Length:

1506

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGTAC

5'SS Class:

major

3'SS Sequence:

TGTTTTCAAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTGTTTTCAAAC

Flanking Amino Acid:

SAVGRGSVSQFKGKKPPATA

Intron Amino Acid Position:

597

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.1

38.1

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

74.3

0.55

70.8

Minor 5ss

-1.6

3.4

49.9

46.7

Minor BPS

56.2

0.17

1.6

67.18

38.6

Associated Gene:

Gene:

AFAP1

Ensembl Gene ID:

ENSAPLG00000012327

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042735

27974536 - 28033041

58506

ENSAPLT00000012905

27974536 - 28035719

61184