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Intron Name: Anas_platyrhynchos_platyrhynchos_4_28054325_28056964_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28054325 - 28056964

Intron Length:

2640

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACTTCA

5'SS Class:

strong_major

3'SS Sequence:

TGTATTTTCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTAAT

U12 Branch Point Sequence:

GTTTCTGTATTT

Flanking Amino Acid:

LDSQTLGNARGNHSGVVLSI

Intron Amino Acid Position:

1015

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

1.1

77.7

33.5

Major BPS

74.4

0.61

0.9

73.6

28.6

Major PPT

77.2

0.61

0.8

72.5

37.6

Minor 5ss

-0.4

2.5

59.7

44.7

Minor BPS

50.6

0.1

2.2

76.04

41.4

Associated Gene:

Gene:

SORCS2

Ensembl Gene ID:

ENSAPLG00000012740

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025750

28054260 - 28537677

483418

ENSAPLT00000013282

28054260 - 28504871

450612