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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_2805705_2806035_F

Intron Information:

Intron Rank:
6
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
2805705 - 2806035
Intron Length:
331

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTGAGCAGT
5'SS Class:
strong_major
3'SS Sequence:
TTTTGTTCTCTAG|G
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
TTCTCAC
U12 Branch Point Sequence:
TCTCACTGAAAT
Flanking Amino Acid:
IYKDSSTFLKGTQSLNPHND
Intron Amino Acid Position:
109

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
86.2
0.85
0.9
77.8
38.7
Major BPS
85
0.87
0.8
85.6
23
Major PPT
84.7
0.78
0.7
77.9
36.6
Minor 5ss
35.7
-1.6
3
48.8
47
Minor BPS
53.1
0.17
1.8
73.24
42.6

Associated Gene:

Gene:
METTL14
Ensembl Gene ID:
ENSAPLG00000002025
Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000002153
2786327 - 2821652
35326
ENSAPLT00000026091
2796358 - 2821128
24771
ENSAPLT00000025782
2796358 - 2821128
24771