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Intron Name: Anas_platyrhynchos_platyrhynchos_4_28103269_28104375_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28103269 - 28104375

Intron Length:

1107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAATCCTA

5'SS Class:

major

3'SS Sequence:

TGCTTTTTAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

TGCTTTTTAACA

Flanking Amino Acid:

KDTSIPLKILKFSIDEGQTW

Intron Amino Acid Position:

445

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.45

1.1

64.5

41.4

Major BPS

0.72

78.4

31.2

Major PPT

80.1

0.68

0.9

76.6

36.3

Minor 5ss

43.2

-0.7

3.1

56.9

41.7

Minor BPS

73.5

0.74

1.2

75.16

36.6

Associated Gene:

Gene:

SORCS2

Ensembl Gene ID:

ENSAPLG00000012740

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020281

28054301 - 28537677

483377

ENSAPLT00000013282

28054260 - 28504871

450612

ENSAPLT00000042740

28056129 - 28537677

481549

ENSAPLT00000026890

28054301 - 28282666

228366

ENSAPLT00000025750

28054260 - 28537677

483418