About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_2812705_2814112_F


Intron Information:

Intron Rank:
10

Intron Class:
major-like

Intron Phase:
0

Intron Coordinates:
2812705 - 2814112

Intron Length:
1408

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GTG|GTAAGACAA

5'SS Class:
strong_major

3'SS Sequence:
CCGTAACATGTAG|T

3'SS Class:
degenerate_major

U2 Branch Point Sequence:
CTATGAA

U12 Branch Point Sequence:
GTGTCCGTAACA

Flanking Amino Acid:
SGEGLDLGRVCLRKWGYRRC

Intron Amino Acid Position:
247

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.3
0.76
0.9
69.6
36.5

Major BPS
63.1
0.33
1.1
55.4
40.3

Major PPT
58.7
0.2
1
51.8
37

Minor 5ss
31.4
-2.1
3.1
36.2
41.7

Minor BPS
64.9
0.46
2.1
76.05
41.3

Associated Gene:

Gene:
METTL14

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2796358 - 2821128
24771

2796358 - 2821128
24771

2786327 - 2821652
35326