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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_2814230_2816854_F

Intron Information:

Intron Rank:
11
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
2814230 - 2816854
Intron Length:
2625

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTAAAGGTT
5'SS Class:
strong_major
3'SS Sequence:
TGTGTGTGTGTAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
ATGTGAC
U12 Branch Point Sequence:
CAGCATGTGACG
Flanking Amino Acid:
DPKAVFQRTKEHCLMGIKGT
Intron Amino Acid Position:
286

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
82.7
0.77
0.9
79.3
34.3
Major BPS
62.5
0.31
1.2
54.8
42.1
Major PPT
67.2
0.39
1.1
61.8
44.4
Minor 5ss
34.5
-1.8
3.9
55
49.2
Minor BPS
38.6
-1
2
37.09
39.3

Associated Gene:

Gene:
METTL14
Ensembl Gene ID:
ENSAPLG00000002025
Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000026091
2796358 - 2821128
24771
ENSAPLT00000025782
2796358 - 2821128
24771
ENSAPLT00000002153
2786327 - 2821652
35326