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Intron Name: Anas_platyrhynchos_platyrhynchos_4_28146598_28155671_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28146598 - 28155671

Intron Length:

9074

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGATGC

5'SS Class:

strong_major

3'SS Sequence:

ATTATGTTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATTAT

U12 Branch Point Sequence:

CTCTGCATAACT

Flanking Amino Acid:

QERVSKDHIFWAVAGVDGDP

Intron Amino Acid Position:

154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

68.6

37.4

Major BPS

75.9

0.64

66.1

40.5

Major PPT

76.6

0.6

0.9

73.4

41.2

Minor 5ss

38.4

-1.3

3.1

47.7

42.5

Minor BPS

55.6

0.25

2.1

76.47

Associated Gene:

Gene:

SORCS2

Ensembl Gene ID:

ENSAPLG00000012740

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026890

28054301 - 28282666

228366

ENSAPLT00000025750

28054260 - 28537677

483418

ENSAPLT00000020281

28054301 - 28537677

483377

ENSAPLT00000013282

28054260 - 28504871

450612

ENSAPLT00000042740

28056129 - 28537677

481549