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Intron Name: Anas_platyrhynchos_platyrhynchos_4_28420766_28504817_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28420766 - 28504817

Intron Length:

84052

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGGAAT

5'SS Class:

major

3'SS Sequence:

ATTGTCTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTGTTTTTCATT

Flanking Amino Acid:

SPEVSGCYSSVILILTKYYH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

1.1

71.6

39.7

Major BPS

100

1.24

0.5

100

Major PPT

80.4

0.68

0.8

78.2

35.7

Minor 5ss

35.9

-1.6

3.3

49.4

46.6

Minor BPS

60.5

0.41

1.7

78.42

39.1

Associated Gene:

Gene:

SORCS2

Ensembl Gene ID:

ENSAPLG00000012740

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013282

28054260 - 28504871

450612