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Intron Name: Anas_platyrhynchos_platyrhynchos_4_2848923_2864785_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2848923 - 2864785

Intron Length:

15863

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGACT

5'SS Class:

strong_major

3'SS Sequence:

CCTCTTCATTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTTTTTATAACT

Flanking Amino Acid:

QPFAIVPQNETPLYVVNHGE

Intron Amino Acid Position:

351

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.8

81.2

32.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

74.9

0.56

0.8

73.6

30.3

Minor 5ss

29.5

-2.4

3.1

40.4

45.5

Minor BPS

67.2

0.62

1.6

83.99

37.1

Associated Gene:

Gene:

SEC24D

Ensembl Gene ID:

ENSAPLG00000002436

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002494

2828184 - 2880942

52759