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Intron Name: Anas_platyrhynchos_platyrhynchos_4_2869886_2872929_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2869886 - 2872929

Intron Length:

3044

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGAAT

5'SS Class:

strong_major

3'SS Sequence:

TGTAACTGTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TCATTTGTAACT

Flanking Amino Acid:

PPGPGYHPQQANYGPQMAGS

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

81.1

32.6

Major BPS

79.2

0.73

75.3

39.4

Major PPT

68.7

0.42

1.1

61.3

44.2

Minor 5ss

33.3

-1.9

3.3

47.8

47.9

Minor BPS

0.3

75.56

41.8

Associated Gene:

Gene:

SEC24D

Ensembl Gene ID:

ENSAPLG00000002436

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002494

2828184 - 2880942

52759