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Intron Name: Anas_platyrhynchos_platyrhynchos_4_28767458_28780905_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28767458 - 28780905

Intron Length:

13448

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TACTGATCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

ATTGTCTAAACC

Flanking Amino Acid:

NPVSSGELEERMSGSQEKQC

Intron Amino Acid Position:

1166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.9

74.1

36.6

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

73.6

0.53

0.9

66.4

39.4

Minor 5ss

38.1

-1.3

3.1

49.4

46.8

Minor BPS

60.7

0.32

1.8

71.85

39.7

Associated Gene:

Gene:

KIAA0232

Ensembl Gene ID:

ENSAPLG00000013499

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027152

28763347 - 28815042

51696

ENSAPLT00000014062

28764175 - 28815042

50868

ENSAPLT00000040644

28628917 - 28815042

186126