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Intron Name: Anas_platyrhynchos_platyrhynchos_4_28787010_28799747_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28787010 - 28799747

Intron Length:

12738

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TGTTATTGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TTTTTTGTTATT

Flanking Amino Acid:

VQCLRSASDESSGIETLVEE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

72.5

39.9

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

78.1

0.63

73.2

41.7

Minor 5ss

41.3

-1

2.8

49.6

Minor BPS

49.6

0.05

2.2

78.47

38.5

Associated Gene:

Gene:

KIAA0232

Ensembl Gene ID:

ENSAPLG00000013499

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027152

28763347 - 28815042

51696

ENSAPLT00000014062

28764175 - 28815042

50868

ENSAPLT00000040644

28628917 - 28815042

186126