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Intron Name: Anas_platyrhynchos_platyrhynchos_4_28895299_28896133_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28895299 - 28896133

Intron Length:

835

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGAA

5'SS Class:

strong_major

3'SS Sequence:

CTGTGTCTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATAAAT

U12 Branch Point Sequence:

GCTGCTTGAATA

Flanking Amino Acid:

KWKTAQNPSKGFSNSRNISE

Intron Amino Acid Position:

980

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

73.7

32.5

Major BPS

65.7

0.39

71.3

30.3

Major PPT

79.1

0.66

0.9

72.2

37.9

Minor 5ss

25.2

-2.9

3.2

30.3

43.5

Minor BPS

53.5

0.11

1.5

60.33

40.3

Associated Gene:

Gene:

MAN2B2

Ensembl Gene ID:

ENSAPLG00000005435

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047607

28895050 - 28921121

26072

ENSAPLT00000005646

28895050 - 28923634

28585