Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_28898583_28898680_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28898583 - 28898680

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACAAAT

5'SS Class:

strong_major

3'SS Sequence:

CTTATCAATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAA

U12 Branch Point Sequence:

CTTACCTTATCA

Flanking Amino Acid:

VSSQGNGQMEVMLHRRLWNN

Intron Amino Acid Position:

788

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

1.1

80.7

33.7

Major BPS

0.72

80.3

31.7

Major PPT

0.52

66.4

38.5

Minor 5ss

40.7

-1

57.6

46.6

Minor BPS

67.3

0.54

1.7

76.08

41.2

Associated Gene:

Gene:

MAN2B2

Ensembl Gene ID:

ENSAPLG00000005435

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047607

28895050 - 28921121

26072

ENSAPLT00000005646

28895050 - 28923634

28585