Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_28898792_28898897_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28898792 - 28898897

Intron Length:

106

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TATGTGTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATCAA

U12 Branch Point Sequence:

TTAATATCAACA

Flanking Amino Acid:

KTYVNNTAARNYYPMVQTAY

Intron Amino Acid Position:

751

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

75.8

34.3

Major BPS

70.2

0.5

72.1

Major PPT

80.7

0.69

0.9

77.2

41.6

Minor 5ss

32.5

-2

3.1

35.2

41.4

Minor BPS

50.3

0.01

1.8

66.66

Associated Gene:

Gene:

MAN2B2

Ensembl Gene ID:

ENSAPLG00000005435

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047607

28895050 - 28921121

26072

ENSAPLT00000005646

28895050 - 28923634

28585