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Intron Name: Anas_platyrhynchos_platyrhynchos_4_28906464_28909339_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28906464 - 28909339

Intron Length:

2876

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTAAG

5'SS Class:

strong_major

3'SS Sequence:

CTTCAACTCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

GTCTCTTCAACT

Flanking Amino Acid:

DSQDFLPYSTEPFQAWTGFY

Intron Amino Acid Position:

346

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

79.8

35.1

Major BPS

78.2

0.7

79.9

32.6

Major PPT

69.7

0.44

0.8

66.5

34.2

Minor 5ss

35.1

-1.7

2.7

42.1

44.6

Minor BPS

68.5

0.66

1.5

80.88

40.9

Associated Gene:

Gene:

MAN2B2

Ensembl Gene ID:

ENSAPLG00000005435

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047607

28895050 - 28921121

26072

ENSAPLT00000005646

28895050 - 28923634

28585