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Intron Name: Anas_platyrhynchos_platyrhynchos_4_28909539_28912206_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28909539 - 28912206

Intron Length:

2668

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TTCTGAATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

GTTTTCTGAATT

Flanking Amino Acid:

FRTSDVLWPWGCDKQFFNAS

Intron Amino Acid Position:

280

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

81.5

32.7

Major BPS

82.1

0.8

71.6

36.4

Major PPT

78.2

0.63

0.9

74.5

39.1

Minor 5ss

35.8

-1.6

3.3

40.8

45.4

Minor BPS

72.5

0.78

1.3

85.39

34.6

Associated Gene:

Gene:

MAN2B2

Ensembl Gene ID:

ENSAPLG00000005435

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005646

28895050 - 28923634

28585

ENSAPLT00000047607

28895050 - 28921121

26072