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Intron Name: Anas_platyrhynchos_platyrhynchos_4_28927127_29027035_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

28927127 - 29027035

Intron Length:

99909

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCGAAT

U12 Branch Point Sequence:

TTGTCTCGAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.7

80.2

27.1

Major BPS

57.2

0.18

1.4

67.3

37.8

Major PPT

85.8

0.8

0.7

84.6

30.3

Minor 5ss

27.5

-2.6

32.5

42.3

Minor BPS

56.4

0.28

1.8

77.37

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012437

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021722

28927043 - 29110744

183702