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Intron Name: Anas_platyrhynchos_platyrhynchos_4_28980147_29058031_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28980147 - 29058031

Intron Length:

77885

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACAGAA

5'SS Class:

major

3'SS Sequence:

TTTTCCCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAA

U12 Branch Point Sequence:

TTTTTCTTTCTT

Flanking Amino Acid:

FLRDHNYVTEADIISTVEFN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

1.1

71.3

34.5

Major BPS

69.8

0.49

37.5

Major PPT

89.5

0.89

0.6

81.6

30.4

Minor 5ss

35.3

-1.7

3.4

46.9

48.4

Minor BPS

-0.2

3.6

83.03

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012437

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036143

28927043 - 29110744

183702