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Intron Name: Anas_platyrhynchos_platyrhynchos_4_29058868_29062922_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29058868 - 29062922

Intron Length:

4055

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGATAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTAAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCAGAA

U12 Branch Point Sequence:

TTTCTTTTAAAG

Flanking Amino Acid:

NAAHSLLSTNDKTIKLWKIT

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

70.4

36.3

Major BPS

64.9

0.37

37.5

Major PPT

84.1

0.77

0.9

86.1

25.6

Minor 5ss

37.4

-1.4

44.2

44.6

Minor BPS

65.1

0.33

1.4

69.62

37.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012437

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021722

28927043 - 29110744

183702

ENSAPLT00000021223

29027036 - 29110744

83709

ENSAPLT00000012970

28926783 - 29110744

183962

ENSAPLT00000036143

28927043 - 29110744

183702

ENSAPLT00000024707

29019347 - 29110744

91398