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Intron Name: Anas_platyrhynchos_platyrhynchos_4_29239704_29261267_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

29239704 - 29261267

Intron Length:

21564

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTGTGC

5'SS Class:

major

3'SS Sequence:

TTGTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTAAT

U12 Branch Point Sequence:

CTGTTCCTACTA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.8

0.44

1.1

57.8

42.2

Major BPS

76.7

0.66

1.2

77.9

34.9

Major PPT

90.3

0.91

0.7

88.9

28.1

Minor 5ss

36.1

-1.6

3.4

50.8

45.8

Minor BPS

47.3

-0.2

1.9

58.73

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005851

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006078

29239510 - 29310577

71068