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Intron Name: Anas_platyrhynchos_platyrhynchos_4_29258843_29261267_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

29258843 - 29261267

Intron Length:

2425

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTTTT

5'SS Class:

major

3'SS Sequence:

TTGTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTAAT

U12 Branch Point Sequence:

CTGTTCCTACTA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.1

80.8

34.4

Major BPS

76.7

0.66

1.2

77.9

34.9

Major PPT

90.3

0.91

0.7

88.9

28.1

Minor 5ss

48.1

-0.2

2.8

68.1

42.7

Minor BPS

47.3

-0.2

1.9

58.73

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005851

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033898

29258755 - 29301832

43078