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Intron Name: Anas_platyrhynchos_platyrhynchos_4_29261543_29271522_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29261543 - 29271522

Intron Length:

9980

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGCA

5'SS Class:

strong_major

3'SS Sequence:

ATTGATGTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TTTATATTGATG

Flanking Amino Acid:

QIEFQQEKSKVGKLREKIQE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

76.8

31.8

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

72.6

0.51

62.3

47.7

Minor 5ss

39.1

-1.2

50.2

46.2

Minor BPS

-0

1.7

63.83

38.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005851

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033898

29258755 - 29301832

43078

ENSAPLT00000006078

29239510 - 29310577

71068