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Intron Name: Anas_platyrhynchos_platyrhynchos_4_29287119_29290400_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29287119 - 29290400

Intron Length:

3282

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAATACTT

5'SS Class:

major

3'SS Sequence:

TCTTTCCTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAA

U12 Branch Point Sequence:

CTTTACTAAAAT

Flanking Amino Acid:

KQHVIDDLTVERERLLRSKK

Intron Amino Acid Position:

415

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

70.1

40.1

Major BPS

0.79

0.8

83.7

25.7

Major PPT

84.8

0.78

0.7

77.7

31.1

Minor 5ss

38.1

-1.3

3.3

54.4

43.6

Minor BPS

56.4

0.28

78.16

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005851

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033898

29258755 - 29301832

43078

ENSAPLT00000006078

29239510 - 29310577

71068