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Intron Name: Anas_platyrhynchos_platyrhynchos_4_29290461_29300082_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29290461 - 29300082

Intron Length:

9622

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

ACTAACTTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAC

U12 Branch Point Sequence:

TTGCTAGTAACT

Flanking Amino Acid:

QRRKSLKPPKRHVVETFFGF

Intron Amino Acid Position:

435

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.8

79.3

31.1

Major BPS

0.45

0.9

67.6

25.3

Major PPT

74.7

0.56

0.9

69.9

40.4

Minor 5ss

33.2

-1.9

2.8

46.4

Minor BPS

48.6

-0

2.2

74.09

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005851

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033898

29258755 - 29301832

43078

ENSAPLT00000006078

29239510 - 29310577

71068