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Intron Name: Anas_platyrhynchos_platyrhynchos_4_29300212_29301673_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29300212 - 29301673

Intron Length:

1462

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

CCTCTTCATTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TCCCTCTTCATT

Flanking Amino Acid:

PATPEEDLDDSTPKEEAELR

Intron Amino Acid Position:

478

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

78.2

36.4

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

67.5

0.39

71.7

32.1

Minor 5ss

38.5

-1.3

2.8

50.4

39.2

Minor BPS

52.6

0.16

1.8

68.07

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005851

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033898

29258755 - 29301832

43078

ENSAPLT00000006078

29239510 - 29310577

71068