Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_29320357_29323585_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29320357 - 29323585

Intron Length:

3229

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

GTTCAGTAAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTGTTTTTATTA

Flanking Amino Acid:

QKMLDLENEKKGYLEEELDY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.9

1.13

0.6

92.3

16.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.25

1.1

54.9

43.6

Minor 5ss

-1.7

2.7

41.8

44.8

Minor BPS

61.1

0.34

1.5

69.94

37.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018584

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021351

29316651 - 29325546

8896