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Intron Name: Anas_platyrhynchos_platyrhynchos_4_29431661_29446854_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29431661 - 29446854

Intron Length:

15194

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCCCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTTTGAACAAAC

Flanking Amino Acid:

ELLQGHDNGQSDRLLIKGGR

Intron Amino Acid Position:

114

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

85.3

0.79

0.7

30.8

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

41.8

-0.6

2.3

62.6

Associated Gene:

Gene:

CRMP1

Ensembl Gene ID:

ENSAPLG00000005068

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005333

29431322 - 29478900

47579