Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_29459025_29460114_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29459025 - 29460114

Intron Length:

1090

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGCTC

5'SS Class:

major

3'SS Sequence:

GTACTACCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

TTTTTTGTACTA

Flanking Amino Acid:

KDLYQMSDSQLYEAFTFLKS

Intron Amino Acid Position:

281

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

62.4

42.1

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

70.9

0.47

0.9

63.2

38.3

Minor 5ss

41.5

-0.9

3.3

59.2

45.5

Minor BPS

-0

2.2

69.67

37.9

Associated Gene:

Gene:

CRMP1

Ensembl Gene ID:

ENSAPLG00000005068

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019302

29433578 - 29478900

45323

ENSAPLT00000005333

29431322 - 29478900

47579