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Intron Name: Anas_platyrhynchos_platyrhynchos_4_29463414_29465515_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29463414 - 29465515

Intron Length:

2102

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAGGC

5'SS Class:

strong_major

3'SS Sequence:

CTTTATCCCTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

CATTCTTTATCC

Flanking Amino Acid:

EGHALSRPEELEAEAVFRAI

Intron Amino Acid Position:

331

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.8

73.3

36.4

Major BPS

87.6

0.93

0.9

89.3

Major PPT

0.68

0.8

77.5

30.9

Minor 5ss

30.8

-2.2

3.3

41.8

Minor BPS

65.1

0.45

1.6

71.12

40.5

Associated Gene:

Gene:

CRMP1

Ensembl Gene ID:

ENSAPLG00000005068

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005333

29431322 - 29478900

47579

ENSAPLT00000019302

29433578 - 29478900

45323