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Intron Name: Anas_platyrhynchos_platyrhynchos_4_29465637_29467228_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29465637 - 29467228

Intron Length:

1592

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAGAC

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTCCCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

AGTTCCTGTATA

Flanking Amino Acid:

ADIIALARKRGPLVFGEPIT

Intron Amino Acid Position:

371

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.9

0.96

0.8

78.6

28.9

Major BPS

84.4

0.85

1.1

34.5

Major PPT

65.9

0.36

64.1

37.1

Minor 5ss

30.7

-2.2

3.3

40.8

45.7

Minor BPS

55.3

0.16

1.8

67.6

38.8

Associated Gene:

Gene:

CRMP1

Ensembl Gene ID:

ENSAPLG00000005068

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019302

29433578 - 29478900

45323

ENSAPLT00000005333

29431322 - 29478900

47579