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Intron Name: Anas_platyrhynchos_platyrhynchos_4_29467386_29470810_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29467386 - 29470810

Intron Length:

3425

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGACCT

5'SS Class:

strong_major

3'SS Sequence:

GTTAACTCCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAA

U12 Branch Point Sequence:

TGTGTGTTAACT

Flanking Amino Acid:

TPDYLNSLLACGDLQVTGSG

Intron Amino Acid Position:

423

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

70.8

39.2

Major BPS

0.57

73.6

28.6

Major PPT

69.7

0.44

0.9

62.4

39.3

Minor 5ss

34.7

-1.7

3.2

46.8

42.3

Minor BPS

58.6

0.35

2.2

79.89

42.3

Associated Gene:

Gene:

CRMP1

Ensembl Gene ID:

ENSAPLG00000005068

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019302

29433578 - 29478900

45323

ENSAPLT00000005333

29431322 - 29478900

47579