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Intron Name: Anas_platyrhynchos_platyrhynchos_4_29470953_29472534_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29470953 - 29472534

Intron Length:

1582

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTA|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

ATGTTGTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAA

U12 Branch Point Sequence:

GTATTATAAACG

Flanking Amino Acid:

RMTVVWDKAVATGKMDESQF

Intron Amino Acid Position:

471

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

0.9

82.5

29.6

Major BPS

78.6

0.71

78.6

Major PPT

76.4

0.59

0.9

Minor 5ss

39.3

-1.2

2.9

Minor BPS

48.7

-0.2

57.89

43.3

Associated Gene:

Gene:

CRMP1

Ensembl Gene ID:

ENSAPLG00000005068

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019302

29433578 - 29478900

45323

ENSAPLT00000005333

29431322 - 29478900

47579