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Intron Name: Anas_platyrhynchos_platyrhynchos_4_29472706_29473985_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29472706 - 29473985

Intron Length:

1280

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

GGTTGATCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

TTGTACTGAACT

Flanking Amino Acid:

KTITAKSHKSAVEYNIFEGM

Intron Amino Acid Position:

528

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

75.5

34.4

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

67.5

0.39

62.7

43.3

Minor 5ss

34.3

-1.8

44.8

42.9

Minor BPS

69.5

0.69

1.6

86.29

39.2

Associated Gene:

Gene:

CRMP1

Ensembl Gene ID:

ENSAPLG00000005068

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005333

29431322 - 29478900

47579

ENSAPLT00000019302

29433578 - 29478900

45323