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Intron Name: Anas_platyrhynchos_platyrhynchos_4_29477085_29478808_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29477085 - 29478808

Intron Length:

1724

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

CTTTCCTGTATT

Flanking Amino Acid:

NLHQSNFSLSGAQIDDNNPR

Intron Amino Acid Position:

643

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.1

1.06

0.7

83.2

30.8

Major BPS

100

1.24

0.5

100

Major PPT

84.6

0.78

0.8

79.6

32.3

Minor 5ss

33.5

-1.9

2.9

40.7

45.5

Minor BPS

61.8

0.45

1.8

80.68

41.2

Associated Gene:

Gene:

CRMP1

Ensembl Gene ID:

ENSAPLG00000005068

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019302

29433578 - 29478900

45323

ENSAPLT00000005333

29431322 - 29478900

47579