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Intron Name: Anas_platyrhynchos_platyrhynchos_4_2948270_2948746_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2948270 - 2948746

Intron Length:

477

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGCTTC

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTTCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TTTGCTTTCATG

Flanking Amino Acid:

IVRYCFLLPLRFTLAAIGIT

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

73.5

38.6

Major BPS

87.6

0.93

0.9

89.3

Major PPT

85.4

0.8

0.7

80.4

24.8

Minor 5ss

48.9

-0.1

2.8

68.8

42.1

Minor BPS

55.8

0.04

1.9

66.31

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002847

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034483

2935653 - 2954272

18620

ENSAPLT00000002931

2947252 - 2953989

6738