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Intron Name: Anas_platyrhynchos_platyrhynchos_4_29486437_29487448_R


Intron Information:

Intron Rank:
18

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
29486437 - 29487448

Intron Length:
1012

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACAGTAG

5'SS Class:
major

3'SS Sequence:
TTATTTCTTTCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TGTTTAT

U12 Branch Point Sequence:
TTTTGTTTTATT

Flanking Amino Acid:
EPPGLKSSLCREKLQRSHKE

Intron Amino Acid Position:
881

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.2
0.48
1.1
60.1
41.3

Major BPS
81.3
0.78
1.1
71.7
44.6

Major PPT
90.5
0.91
0.7
89.1
27.5

Minor 5ss
34.4
-1.8
3.5
46
49.3

Minor BPS
59.2
0.37
2
83.31
38.3

Associated Gene:

Gene:
EVC

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

29486355 - 29539776
53422

29486355 - 29535766
49412