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Intron Name: Anas_platyrhynchos_platyrhynchos_4_2948822_2949311_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2948822 - 2949311

Intron Length:

490

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCAGAT

U12 Branch Point Sequence:

CTTTCCAGCATT

Flanking Amino Acid:

TTLVGQLPNSSVKNYLSEVV

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.7

0.98

0.7

81.3

32.8

Major BPS

61.5

0.29

1.1

56.9

40.5

Major PPT

90.3

0.91

0.6

88.5

21.1

Minor 5ss

30.9

-2.2

3.2

39.6

46.4

Minor BPS

-0

2.2

73.6

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002847

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034483

2935653 - 2954272

18620

ENSAPLT00000002931

2947252 - 2953989

6738