Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_29491773_29494841_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29491773 - 29494841

Intron Length:

3069

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTATG

5'SS Class:

strong_major

3'SS Sequence:

ACCATTATTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAA

U12 Branch Point Sequence:

TTTTACAAAACC

Flanking Amino Acid:

KKLQQLKSLQAERSERNRLR

Intron Amino Acid Position:

736

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.5

35.1

Major BPS

73.5

0.59

81.3

29.9

Major PPT

73.9

0.54

0.9

39.5

Minor 5ss

45.4

-0.5

2.5

59.2

45.4

Minor BPS

54.9

0.13

2.1

76.67

39.2

Associated Gene:

Gene:

EVC

Ensembl Gene ID:

ENSAPLG00000004565

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004727

29486355 - 29535766

49412

ENSAPLT00000041236

29416126 - 29535766

119641

ENSAPLT00000034141

29486355 - 29539776

53422