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Intron Name: Anas_platyrhynchos_platyrhynchos_4_2949402_2949611_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2949402 - 2949611

Intron Length:

210

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGAG

5'SS Class:

major

3'SS Sequence:

CTTGTAATTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

AATCTTGTAATT

Flanking Amino Acid:

ALSGTIHYHNRENKPQKGGI

Intron Amino Acid Position:

197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.7

1.3

72.3

39.5

Major BPS

84.4

0.85

1.1

34.5

Major PPT

77.4

0.62

0.9

70.6

38.9

Minor 5ss

27.4

-2.6

2.9

31.5

42.8

Minor BPS

49.1

0.01

1.9

68.17

37.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002847

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034483

2935653 - 2954272

18620

ENSAPLT00000002931

2947252 - 2953989

6738