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Intron Name: Anas_platyrhynchos_platyrhynchos_4_29499089_29500409_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29499089 - 29500409

Intron Length:

1321

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

TTGTTTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGATTTTTAATG

Flanking Amino Acid:

VVSRLSCLSDESVNYILQKH

Intron Amino Acid Position:

548

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

75.5

40.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

91.8

0.94

0.7

87.5

Minor 5ss

40.6

-1

2.8

48.1

41.6

Minor BPS

66.3

0.37

1.3

64.21

38.2

Associated Gene:

Gene:

EVC

Ensembl Gene ID:

ENSAPLG00000004565

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041236

29416126 - 29535766

119641

ENSAPLT00000034141

29486355 - 29539776

53422

ENSAPLT00000004727

29486355 - 29535766

49412