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Intron Name: Anas_platyrhynchos_platyrhynchos_4_2951923_2952465_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2951923 - 2952465

Intron Length:

543

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTGAG

5'SS Class:

strong_major

3'SS Sequence:

AAAACACTTGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTATTTCTAATT

Flanking Amino Acid:

VWYMPPMVRKEGEDAVQFAN

Intron Amino Acid Position:

358

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

74.2

36.3

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

50.3

0.01

1.1

46.9

39.6

Minor 5ss

32.1

-2

3.1

40.2

45.9

Minor BPS

63.4

0.5

1.6

80.83

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002847

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034483

2935653 - 2954272

18620

ENSAPLT00000002931

2947252 - 2953989

6738