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Intron Name: Anas_platyrhynchos_platyrhynchos_4_2952546_2953133_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2952546 - 2953133

Intron Length:

588

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTGTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAA

U12 Branch Point Sequence:

TTCTGCTGAAAA

Flanking Amino Acid:

AHQGGLTELPWDGGLKRAKV

Intron Amino Acid Position:

384

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.8

79.2

28.9

Major BPS

0.42

1.1

57.3

41.7

Major PPT

77.3

0.62

0.9

72.8

37.5

Minor 5ss

29.1

-2.4

3.2

36.8

41.9

Minor BPS

53.5

0.11

69.51

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002847

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034483

2935653 - 2954272

18620

ENSAPLT00000002931

2947252 - 2953989

6738