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Intron Name: Anas_platyrhynchos_platyrhynchos_4_29557280_29559605_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29557280 - 29559605

Intron Length:

2326

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGCT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

ATTAATTTAAAT

Flanking Amino Acid:

FTITEEEKTKISYSHAIHAS

Intron Amino Acid Position:

194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

81.2

30.6

Major BPS

100

1.24

0.5

100

Major PPT

87.8

0.85

0.7

85.6

27.3

Minor 5ss

34.7

-1.7

3.3

50.4

Minor BPS

60.2

0.4

1.6

77.79

37.9

Associated Gene:

Gene:

EVC2

Ensembl Gene ID:

ENSAPLG00000004238

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034316

29542582 - 29608420

65839

ENSAPLT00000004359

29542582 - 29608420

65839